Index

_ | E | G | O | R | S | V | Z

_

  • __init__() (hgflask.client.Track method)
    • (hgflask.client.View method)

E

  • exportAsPng() (built-in function)
  • exportAsSvg() (built-in function)
  • exportAsViewConfString() (built-in function)

G

  • getMinMaxValue() (built-in function)
  • getRangeSelection() (built-in function)

O

  • on() (built-in function)

R

  • reload() (built-in function)

S

  • setViewConfig() (built-in function), [1]
  • shareViewConfigAsLink() (built-in function), [1]
  • start() (in module hgflask.server)

V

  • viewer() (built-in function)

Z

  • zoomTo() (built-in function)
  • zoomToDataExtent() (built-in function)

HiGlass

  • Tutorial
    • Prerequisites
    • Quickly viewing a dataset
    • Running HiGlass locally
    • Adding data
    • Viewing data in the client
  • Jupyter Notebooks
    • Installation
    • Usage
  • Python API
    • hgflask
    • hgflask.client
  • Javascript API
    • Overview
    • API Functions
  • Data Preparation
    • Bed Files
    • Bedpe-like Files
    • BedGraph files
    • bigWig files
    • Gene Annotation Tracks
    • Hitile files
    • Cooler files
    • Multivec Files
    • Epilogos Data (multivec)
    • Other Data (multivec)
  • Track Types
    • Linking value scales
    • Bed-like
    • Gene Annotations
    • Heatmap
    • Rotated 2D Heatmap
    • 2D Rectangle Domain
    • Horizontal 2D Rectangle Domain
    • Line
    • Bar
    • Point
    • 1D Heatmap
    • Chromosome Labels
    • Chromosome Grid
    • Stacked Bars
    • Multiple Lines
    • Multiple Bar Charts
    • 1D Annotations
  • Views
    • Genome Position Search Box
    • View synchronization
  • Server
    • Configuration
    • Development
    • Testing
    • API
  • Docker
    • Running locally
    • Running remotely
  • View Configs
    • Show a specific genomic location
    • Upload a viewconf to the server
  • Developer Documentation
  • Viewer
    • Adding views
    • Closing and resizing views
    • Replacing Tracks
    • Synchronizing zoom and location
    • Adding cross sections

Related Topics

  • Documentation overview

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